BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011E07SP1|AL426228
(763 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1564 1513 0.0
>3x_Contig1564
Length = 11038
Score = 1513 bits (763), Expect = 0.0
Identities = 763/763 (100%)
Strand = Plus / Plus
Query: 1 atccggtatgcccagataatgtagcatgtttaaagagagttgttgttcctgacaaagcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6489 atccggtatgcccagataatgtagcatgtttaaagagagttgttgttcctgacaaagcaa 6548
Query: 61 gtcttaacacattgagggcggaagtggattcaatgaaggctcttagaggcaacaaattca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6549 gtcttaacacattgagggcggaagtggattcaatgaaggctcttagaggcaacaaattca 6608
Query: 121 ttgtttcgtatatcgattcacatgccactaagtctccggttaacgtaggaatgtatgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6609 ttgtttcgtatatcgattcacatgccactaagtctccggttaacgtaggaatgtatgaag 6668
Query: 181 tgtacttgcttatggaatactgttctggcggtgggcttatcgatttcatgaataccagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6669 tgtacttgcttatggaatactgttctggcggtgggcttatcgatttcatgaataccagat 6728
Query: 241 tgcagaatagacttcaagagtttgagattctcaatatcatgagtcaagtgagtcaaggtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6729 tgcagaatagacttcaagagtttgagattctcaatatcatgagtcaagtgagtcaaggtg 6788
Query: 301 ttgctgctatgcatgctctgcaaccaccattgatccatagagatattaagattgagaatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6789 ttgctgctatgcatgctctgcaaccaccattgatccatagagatattaagattgagaatg 6848
Query: 361 tcttgctctcgaaaaatcatgaatttaagctttgtgatttcggatcagtgtctggtgtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6849 tcttgctctcgaaaaatcatgaatttaagctttgtgatttcggatcagtgtctggtgtca 6908
Query: 421 ttcgagcgccaagaaatacagaggagtttaactatgtccagtacgatataatgaaaaata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6909 ttcgagcgccaagaaatacagaggagtttaactatgtccagtacgatataatgaaaaata 6968
Query: 481 caacggcgcagtacagatgtccagaaatgatcgacttataccgtggtttaccgatagacg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6969 caacggcgcagtacagatgtccagaaatgatcgacttataccgtggtttaccgatagacg 7028
Query: 541 agaagtctgatatttgggcattgggtgtcttcctgtacaaaacatgctattatactacgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7029 agaagtctgatatttgggcattgggtgtcttcctgtacaaaacatgctattatactacgc 7088
Query: 601 cgttcgagaaaaatggggaatctgccatcttagcatctaaattcgagttcccagcctatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7089 cgttcgagaaaaatggggaatctgccatcttagcatctaaattcgagttcccagcctatc 7148
Query: 661 cacgttattctgatagagtgaaaaatttgataagtgtcatgttacgtgtagatcctctga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7149 cacgttattctgatagagtgaaaaatttgataagtgtcatgttacgtgtagatcctctga 7208
Query: 721 aacgtccgaatatttgtcaagtggtagaagaggtttcacgtat 763
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7209 aacgtccgaatatttgtcaagtggtagaagaggtttcacgtat 7251
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4742
Number of Sequences: 1807
Number of extensions: 4742
Number of successful extensions: 23
Number of sequences better than 1.0e-20: 1
length of query: 763
length of database: 10,358,551
effective HSP length: 16
effective length of query: 747
effective length of database: 10,329,639
effective search space: 7716240333
effective search space used: 7716240333
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)